@article {bai2016activity, title = {An activity index for raw accelerometry data and its comparison with other activity metrics}, journal = {PloS ONE}, volume = {11}, number = {8}, year = {2016}, pages = {e0160644}, publisher = {Public Library of Science}, author = {Bai, Jiawei and Di, Chongzhi and Xiao, Luo and Evenson, Kelly R and LaCroix, Andrea Z and Crainiceanu, Ciprian M and Buchner, David M} } @article {833, title = {Cross-sectional and longitudinal association of body mass index and brain volume.}, journal = {Hum Brain Mapp}, volume = {35}, year = {2014}, month = {2014 Jan}, pages = {75-88}, abstract = {

Although a link between body mass index (BMI) and brain volume has been established in several cross-sectional studies, evidence of the association between change in BMI over time and changes in brain structure is limited. Using data from a cohort of 347 former lead workers and community controls with two magnetic resonance imaging scans over a period of ~5 years, we estimated cross-sectional and longitudinal associations of BMI and brain volume using both region of interest (ROI) and voxel-based morphometric (VBM) methods. We found that associations of BMI and brain volume were not significantly different in former lead workers when compared with community controls. In the cross-sectional analysis, higher BMIs were associated with smaller brain volumes in gray matter (GM) using both ROI and VBM approaches. No associations with white matter (WM) were observed. In the longitudinal analysis, higher baseline BMI was associated with greater decline in temporal and occipital GM ROI volumes. Change in BMI over the 5-year period was only associated with change in hippocampal volume and was not associated with change in any of the GM ROIs. Overall, higher BMI was associated with lower GM volume in several ROIs and with declines in volume in temporal and occipital GM over time. These results suggest that sustained high body mass may contribute to progressive temporal and occipital atrophy.

}, keywords = {Aged, Atrophy, Body Mass Index, Brain, Cross-Sectional Studies, Humans, Image Interpretation, Computer-Assisted, Longitudinal Studies, Magnetic Resonance Imaging, Male, Middle Aged, Obesity}, issn = {1097-0193}, doi = {10.1002/hbm.22159}, author = {Bobb, Jennifer F and Schwartz, Brian S and Davatzikos, Christos and Caffo, Brian} } @article {837, title = {A hierarchical model for simultaneous detection and estimation in multi-subject fMRI studies.}, journal = {Neuroimage}, volume = {98}, year = {2014}, month = {2014 Sep}, pages = {61-72}, abstract = {

In this paper we introduce a new hierarchical model for the simultaneous detection of brain activation and estimation of the shape of the hemodynamic response in multi-subject fMRI studies. The proposed approach circumvents a major stumbling block in standard multi-subject fMRI data analysis, in that it both allows the shape of the hemodynamic response function to vary across region and subjects, while still providing a straightforward way to estimate population-level activation. An efficient estimation algorithm is presented, as is an inferential framework that allows for not only tests of activation, but also tests for deviations from some canonical shape. The model is validated through simulations and application to a multi-subject fMRI study of thermal pain.

}, issn = {1095-9572}, doi = {10.1016/j.neuroimage.2014.04.052}, author = {Degras, David and Lindquist, Martin A} } @article {793, title = {Multilevel sparse functional principal component analysis.}, journal = {Stat}, volume = {3}, year = {2014}, month = {2014 Jan 29}, pages = {126-143}, abstract = {

We consider analysis of sparsely sampled multilevel functional data, where the basic observational unit is a function and data have a natural hierarchy of basic units. An example is when functions are recorded at multiple visits for each subject. Multilevel functional principal component analysis (MFPCA; Di et al. 2009) was proposed for such data when functions are densely recorded. Here we consider the case when functions are sparsely sampled and may contain only a few observations per function. We exploit the multilevel structure of covariance operators and achieve data reduction by principal component decompositions at both between and within subject levels. We address inherent methodological differences in the sparse sampling context to: 1) estimate the covariance operators; 2) estimate the functional principal component scores; 3) predict the underlying curves. Through simulations the proposed method is able to discover dominating modes of variations and reconstruct underlying curves well even in sparse settings. Our approach is illustrated by two applications, the Sleep Heart Health Study and eBay auctions.

}, issn = {0038-9986}, doi = {10.1002/sta4.50}, author = {Di, Chongzhi and Crainiceanu, Ciprian M and Jank, Wolfgang S} } @article {825, title = {Isoosmolar enemas demonstrate preferential gastrointestinal distribution, safety, and acceptability compared with hyperosmolar and hypoosmolar enemas as a potential delivery vehicle for rectal microbicides.}, journal = {AIDS Res Hum Retroviruses}, volume = {29}, year = {2013}, month = {2013 Nov}, pages = {1487-95}, abstract = {

Rectally applied antiretroviral microbicides for preexposure prophylaxis (PrEP) of HIV infection are currently in development. Since enemas (rectal douches) are commonly used by men who have sex with men prior to receptive anal intercourse, a microbicide enema could enhance PrEP adherence by fitting seamlessly within the usual sexual practices. We assessed the distribution, safety, and acceptability of three enema types-hyperosmolar (Fleet), hypoosmolar (distilled water), and isoosmolar (Normosol-R)-in a crossover design. Nine men received each enema type in random order. Enemas were radiolabeled [(99m)Tc-diethylene triamine pentaacetic acid (DTPA)] to assess enema distribution in the colon using single photon emission computed tomography/computed tomography (SPECT/CT) imaging. Plasma (99m)Tc-DTPA indicated mucosal permeability. Sigmoidoscopic colon tissue biopsies were taken to assess injury as well as tissue penetration of the (99m)Tc-DTPA. Acceptability was assessed after each product use and at the end of the study. SPECT/CT imaging showed that the isoosmolar enema had greater proximal colonic distribution (up to the splenic flexure) and greater luminal and colon tissue concentrations of (99m)Tc-DTPA when compared to the other enemas (p<0.01). Colon biopsies also showed that only the hyperosmolar enema caused sloughing of the colonic epithelium (p<0.05). In permeability testing, the hypoosmolar enema had higher plasma (99m)Tc-DTPA 24-h area under the concentration-time curve and peak concentration compared to the hyperosmolar and isoosmolar enemas, respectively. Acceptability was generally good with no clear preferences among the three enema types. The isoosmolar enema was superior or similar to the other enemas in all categories and is a good candidate for further development as a rectal microbicide vehicle.

}, keywords = {Anti-Infective Agents, Biopsy, Colon, Sigmoid, Enema, HIV Infections, Humans, Intestinal Mucosa, Male, Patient Acceptance of Health Care, Solutions, Tomography, Emission-Computed, Single-Photon}, issn = {1931-8405}, doi = {10.1089/AID.2013.0189}, author = {Leyva, Francisco J and Bakshi, Rahul P and Fuchs, Edward J and Li, Liye and Caffo, Brian S and Goldsmith, Arthur J and Ventuneac, Ana and Carballo-Di{\'e}guez, Alex and Du, Yong and Leal, Jeffrey P and Lee, Linda A and Torbenson, Michael S and Hendrix, Craig W} } @article {811, title = {Relationships between retinal axonal and neuronal measures and global central nervous system pathology in multiple sclerosis.}, journal = {JAMA Neurol}, volume = {70}, year = {2013}, month = {2013 Jan}, pages = {34-43}, abstract = {

OBJECTIVE: To determine the relationships between conventional and segmentation-derived optical coherence tomography (OCT) retinal layer thickness measures with intracranial volume (a surrogate of head size) and brain substructure volumes in multiple sclerosis (MS).

DESIGN: Cross-sectional study.

SETTING: Johns Hopkins University, Baltimore, Maryland.

PARTICIPANTS: A total of 84 patients with MS and 24 healthy control subjects.

MAIN OUTCOME MEASURES: High-definition spectral-domain OCT conventional and automated segmentation-derived discrete retinal layer thicknesses and 3-T magnetic resonance imaging brain substructure volumes.

RESULTS: Peripapillary retinal nerve fiber layer as well as composite ganglion cell layer+inner plexiform layer thicknesses in the eyes of patients with MS without a history of optic neuritis were associated with cortical gray matter (P=.01 and P=.04, respectively) and caudate (P=.04 and P=.03, respectively) volumes. Inner nuclear layer thickness, also in eyes without a history of optic neuritis, was associated with fluid-attenuated inversion recovery lesion volume (P=.007) and inversely associated with normal-appearing white matter volume (P=.005) in relapsing-remitting MS. As intracranial volume was found to be related with several of the OCT measures in patients with MS and healthy control subjects and is already known to be associated with brain substructure volumes, all OCT-brain substructure relationships were adjusted for intracranial volume. CONCLUSIONS Retinal measures reflect global central nervous system pathology in multiple sclerosis, with thicknesses of discrete retinal layers each appearing to be associated with distinct central nervous system processes. Moreover, OCT measures appear to correlate with intracranial volume in patients with MS and healthy control subjects, an important unexpected factor unaccounted for in prior studies examining the relationships between peripapillary retinal nerve fiber layer thickness and brain substructure volumes.

}, keywords = {Adult, Axons, Caudate Nucleus, Central Nervous System, Cerebral Cortex, Cross-Sectional Studies, Female, Humans, Magnetic Resonance Imaging, Male, Middle Aged, Multiple Sclerosis, Retina, Retinal Neurons, Tomography, Optical Coherence}, issn = {2168-6157}, doi = {10.1001/jamaneurol.2013.573}, author = {Saidha, Shiv and Sotirchos, Elias S and Oh, Jiwon and Syc, Stephanie B and Seigo, Michaela A and Shiee, Navid and Eckstein, Chistopher and Durbin, Mary K and Oakley, Jonathan D and Meyer, Scott A and Frohman, Teresa C and Newsome, Scott and Ratchford, John N and Balcer, Laura J and Pham, Dzung L and Crainiceanu, Ciprian M and Frohman, Elliot M and Reich, Daniel S and Calabresi, Peter A} } @article {685, title = {Analysis of tiling array expression studies with flexible designs in Bioconductor (waveTiling.}, journal = {BMC Bioinformatics}, volume = {13}, year = {2012}, month = {2012 Sep 14}, pages = {234}, abstract = {

ABSTRACT: BACKGROUND: Existing statistical methods for tiling array transcriptome data either focus on transcript discovery in one biological or experimental condition or on the detection of differential expression between two conditions. Increasingly often, however, biologists are interested in time-course studies, studies with more than two conditions or even multiple-factor studies. As these studies are currently analyzed with the traditional microarray analysis techniques, they do not exploit the genome-wide nature of tiling array data to its full potential. RESULTS: We present an R Bioconductor package, waveTiling, which implements a wavelet-based model for analyzing transcriptome data and extends it towards more complex experimental designs. With waveTiling the user is able to discover (1) group-wise expressed regions, (2) differentially expressed regions between any two groups in single-factor studies and in (3) multifactorial designs. Moreover, for time-course experiments it is also possible to detect (4) linear time effects and (5) a circadian rhythm of transcripts. By considering the expression values of the individual tiling probes as a function of genomic position, effect regions can be detected regardless of existing annotation. Three case studies with different experimental set-ups illustrate the use and the flexibility of the model-based transcriptome analysis. CONCLUSIONS: The waveTiling package provides the user with a convenient tool for the analysis of tiling array trancriptome data for a multitude of experimental set-ups. Regardless of the study design, the probe-wise analysis allows for the detection of transcriptional effects in both exonic, intronic and intergenic regions, without prior consultation of existing annotation.

}, issn = {1471-2105}, doi = {10.1186/1471-2105-13-234}, author = {De Beuf, K. and Pipelers, Peter and Andriankaja, Megan and Thas, O. and Inz{\'e}, Dirk and Crainiceanu, C and Clement, Lieven} } @article {nicole, title = {Distribution of cell-free and cell-associated HIV surrogates in the female genital tract following simulated vaginal intercourse}, journal = {Appeared online in the Journal of Infectious Diseases}, year = {2012}, author = {Louissaint, N and Nimmagadda, S and Bakshi, R and Du, Y and Macura, K and King, K and Wahl, R and Goldsmith, J and Caffo, B and Cao, Y and Anderson, J and Fuchs, E and Hendrix, C} } @article {pmid22499683, title = {Fast wavelet based functional models for transcriptome analysis with tiling arrays}, journal = {Stat Appl Genet Mol Biol}, volume = {11}, number = {1}, year = {2012}, pages = {1{\textendash}36}, author = {Clement, Lieven and De Beuf, K. and Thas, O. and Vuylsteke, M. and Irizarry, R and Crainiceanu, C} } @article {james, title = {Genetic risk factors for longitudinal changes in structural MRI in former organolead workers}, journal = {Accepted in the Journal of Aging Research}, year = {2012}, author = {James, B and Caffo, B and Stewart, W and Yousem, D and Davatzikos, C. and Schwartz, B} } @article {pmid22006982, title = {Optical coherence tomography segmentation reveals ganglion cell layer pathology after optic neuritis}, journal = {Brain}, volume = {135}, number = {Pt 2}, year = {2012}, month = {Feb}, pages = {521{\textendash}533}, author = {Syc, S. B. and Saidha, S. and Newsome, S and Ratchford, J and Levy, M. and Ford, E. and Crainiceanu, C and Durbin, M. K. and Oakley, J. D. and Meyer, S. A. and Frohman, E. M. and Calabresi, P} } @article {rectalab, title = {Quantification of the spatial distribution of rectally-applied surrogates for microbicide and semen in colon with SPECT imaging}, journal = {Accepted in the British Journal of Clinical Pharmacology}, year = {2012}, author = {Cao, Y and Caffo, B and Fuchs, E and Lee, L and Du, Y and Li, L and Bakshi, R and Khan, W and Wahl, R and Grohskopf, L and Hendrix, C} } @article {710, title = {Relationships Between Retinal Axonal and Neuronal Measures and Global Central Nervous System Pathology in Multiple Sclerosis.}, journal = {Arch Neurol}, year = {2012}, month = {2012 Oct 1}, pages = {1-10}, abstract = {

OBJECTIVE To determine the relationships between conventional and segmentation-derived optical coherence tomography (OCT) retinal layer thickness measures with intracranial volume (a surrogate of head size) and brain substructure volumes in multiple sclerosis (MS). DESIGN Cross-sectional study. SETTING Johns Hopkins University, Baltimore, Maryland. PARTICIPANTS A total of 84 patients with MS and 24 healthy control subjects. MAIN OUTCOME MEASURES High-definition spectral-domain OCT conventional and automated segmentation-derived discrete retinal layer thicknesses and 3-T magnetic resonance imaging brain substructure volumes. RESULTS Peripapillary retinal nerve fiber layer as well as composite ganglion cell layer\ +\ inner plexiform layer thicknesses in the eyes of patients with MS without a history of optic neuritis were associated with cortical gray matter (P\ =\ .01 and P\ =\ .04, respectively) and caudate (P\ =\ .04 and P\ =\ .03, respectively) volumes. Inner nuclear layer thickness, also in eyes without a history of optic neuritis, was associated with fluid-attenuated inversion recovery lesion volume (P\ =\ .007) and inversely associated with normal-appearing white matter volume (P\ =\ .005) in relapsing-remitting MS. As intracranial volume was found to be related with several of the OCT measures in patients with MS and healthy control subjects and is already known to be associated with brain substructure volumes, all OCT-brain substructure relationships were adjusted for intracranial volume. CONCLUSIONS Retinal measures reflect global central nervous system pathology in multiple sclerosis, with thicknesses of discrete retinal layers each appearing to be associated with distinct central nervous system processes. Moreover, OCT measures appear to correlate with intracranial volume in patients with MS and healthy control subjects, an important unexpected factor unaccounted for in prior studies examining the relationships between peripapillary retinal nerve fiber layer thickness and brain substructure volumes.

}, issn = {1538-3687}, doi = {10.1001/archneurol.2013.573}, author = {Saidha, Shiv and Sotirchos, Elias S and Oh, Jiwon and Syc, Stephanie B and Seigo, Michaela A and Shiee, Navid and Eckstein, Chistopher and Durbin, Mary K and Oakley, Jonathan D and Meyer, Scott A and Frohman, Teresa C and Newsome, Scott and Ratchford, John N and Balcer, Laura J and Pham, Dzung L and Crainiceanu, Ciprian M and Frohman, Elliot M and Reich, Daniel S and Calabresi, Peter A} } @article {830, title = {Total white matter hyperintensity volume in bipolar disorder patients and their healthy relatives.}, journal = {Bipolar Disord}, volume = {14}, year = {2012}, month = {2012 Dec}, pages = {888-93}, abstract = {

OBJECTIVES: White matter hyperintensities (WMH) are more common in subjects with bipolar disorder (BP) than in healthy subjects (HS). Few studies have examined the effect of the diagnostic type of bipolar illness on WMH burden, and none have approached this question through a direct measurement of the volume of affected white matter in relationship to familiality. In this pilot study, we utilized a volumetric measurement of WMH to investigate the relationship between the total volume of WMH and the familiality and type of BP.

METHODS: Forty-five individuals with bipolar I disorder (BP-I) with psychotic features, BP-I without psychotic features, or bipolar II disorder (BP-II), seven of their unaffected relatives, and 32 HS were recruited for participation. T-2 weighted magnetic resonance imaging scans were obtained on all subjects, and the total volume of all WMH for each subject was measured in cubic centimeters. The significance of difference between groups was tested using ANOVA with post-hoc adjustment for multiple comparisons. Further, we used logistic regression to test for trends between symptom load and total WMH volume.

RESULTS: The mean total volume of WMH in BP-I patients with psychotic features was significantly higher (p < 0.05) than that of HS. Further, we observed a positive linear trend by familiality and type of affectedness when comparing mean total WMH volume of HS, unaffected family members, subjects with BP-II, and BP-I with and without a history of psychosis (p < 0.05).

CONCLUSIONS: Based on a quantitative technique, WMH burden appears to be associated with familiality and type of BP. The significance of these findings remains to be fully elucidated.

}, keywords = {Adult, Analysis of Variance, Bipolar Disorder, Brain, Female, Humans, Image Processing, Computer-Assisted, Leukoencephalopathies, Magnetic Resonance Imaging, Male, Nerve Fibers, Myelinated}, issn = {1399-5618}, doi = {10.1111/bdi.12019}, author = {Tighe, Sarah K and Reading, Sarah A and Rivkin, Paul and Caffo, Brian and Schweizer, Barbara and Pearlson, Godfrey and Potash, James B and Depaulo, J Raymond and Bassett, Susan S} } @article {lewis2011differential, title = {Differential involvement of striato-and cerebello-thalamo-cortical pathways in tremor-and akinetic/rigid-predominant Parkinson{\textquoteright}s disease}, journal = {Neuroscience}, year = {2011}, publisher = {Elsevier}, author = {Lewis, M.M. and Du, G. and Sen, S. and Kawaguchi, A. and Truong, Y. and Lee, S. and Mailman, R.B. and Huang, X.} } @article {nicole2, title = {Distribution of Cell-free and Cell-associated HIV surrogates in the Colon Following Simulated Receptive Anal Intercourse in Healthy Men}, journal = {Journal of Acquired Immune Defficiency Syndromes, Basic and Translational Science}, volume = {59}, number = {1}, year = {2011}, pages = {10{\textendash}17}, author = {Louissaint, N and Nimmagadda, S and Fuchs, E and Bashki, R and Cao, Y and Lee, L and Goldsmith, J and Caffo, B and Du, Y and King, K and Menendez, F and Torbenson, M and Hendrix, C} } @article {vadimNI, title = {Functional principal components model for high-dimensional brain imaging}, journal = {Neuroimage, NIHSMID: 316403}, volume = {58}, number = {3}, year = {2011}, pages = {772 {\textendash} 784}, author = {Zipunnikov, V. and Caffo, B and Yousem, D and Davatziko, C and Schwartz, B and Crainiceanu, C} } @article {vadimHDMFPCA, title = {Multilevel functional principal component analysis for high-dimensional data}, journal = {Journal of Computational and Graphical Statistics, NIMHID: 306063}, volume = {20}, number = {4}, year = {2011}, pages = {852{\textendash}873}, author = {Zipunnikov, V. and Caffo, B and Crainiceanu, C and Yousem, D and Davatzikos, C. and Schwartz, B} } @article {goldsmithAAS, title = {Nonlinear tube-fitting for the analysis of anatomical and functional structures}, journal = {Annals of Applied Statistics, PMCID: PMC3119905}, volume = {5}, number = {1}, year = {2011}, pages = {337-363}, issn = {1932-6157}, doi = {10.1214/10-AOAS384}, author = {Goldsmith, J and Caffo, B and Crainiceanu, C and Reich, D. and Du, Y and Hendrix, C} } @article {caffoSleep, title = {A novel approach to prediction of mild sleep disorders in a population-based sample: the Sleep Heart Health Study}, journal = {Sleep, PMCID: PMC2982734}, volume = {33}, number = {12}, year = {2011}, pages = {1641{\textendash}1648}, author = {Caffo, B and Diener-West, M and Punjabi, N and Samet, J} } @article {schwartz2010evaluation, title = {Evaluation of Cumulative Lead Dose and Longitudinal Changes in Structural Magnetic Resonance Imaging in Former Organolead Workers}, journal = {Journal of Occupational and Environmental Medicine, PMCID: PMC2869464}, volume = {52}, number = {4}, year = {2010}, pages = {407{\textendash}414}, author = {Schwartz, B and Caffo, B and Stewart, W and Hedlin, H and James, B and Yousem, D and Davatzikos, C.} } @article {Wager09b, title = {Brain mediators of cardiovascular responses to social threat, Part II: Prefrontal subcortical pathways and relationship with anxiety}, journal = {NeuroImage}, volume = {47}, year = {2009}, pages = {836-851}, author = {Wager, T.D. and van Ast, V. and Davidson, M.L. and Lindquist, Martin A and Ochsner, K.N.} } @article {pmid20625442, title = {Generalized Multilevel Functional Regression}, journal = {J Am Stat Assoc}, volume = {104}, number = {488}, year = {2009}, month = {Dec}, pages = {1550{\textendash}1561}, author = {Crainiceanu, C and Staicu, A. M. and Di, C.Z.} } @article {pmid20049214, title = {Mercury induces an unopposed inflammatory response in human peripheral blood mononuclear cells in vitro}, journal = {Environ. Health Perspect.}, volume = {117}, number = {12}, year = {2009}, month = {Dec}, pages = {1932{\textendash}1938}, author = {Gardner, R. M. and Nyland, J. F. and Evans, S. L. and Wang, S. B. and Doyle, K. M. and Crainiceanu, C and Silbergeld, E. K.} } @article {di2009multilevel, title = {Multilevel functional principal component analysis}, journal = {Annals of Applied Statistics, PMCID: PMC2835171}, volume = {3}, number = {1}, year = {2009}, pages = {458-488}, author = {Di, C and Crainiceanu, C and Caffo, B and Punjabi, N} } @article {crainiceanu2009nonparametric, title = {Nonparametric signal extraction and measurement error in the analysis of electroencephalographic activity during sleep}, journal = {Journal of the American Statistical Association, PMCID: PMC2802498}, volume = {104}, number = {486}, year = {2009}, pages = {541{\textendash}555}, publisher = {ASA}, author = {Crainiceanu, C and Caffo, B and Di, C and Punjabi, N} } @article {Crai:Caff:Di:Punj:nonp:2009, title = {Nonparametric Signal Extraction and Measurement Error in the Analysis of Electroencephalographic Activity During Sleep}, journal = {Journal of the American Statistical Association}, volume = {104}, number = {486}, year = {2009}, pages = {541{\textendash}555}, keywords = {Hierarchical smoothing, Measurement error, penalized splines, Sleep}, author = {Crainiceanu, C and Caffo, B and Di, Chong-Zhi and Punjabi, Naresh M} } @article {Crai:Domi:adju:2008, title = {Adjustment Uncertainty in Effect Estimation}, journal = {Biometrika}, volume = {95}, number = {3}, year = {2008}, pages = {635{\textendash}651}, keywords = {Air pollution, Bayesian model averaging}, author = {Crainiceanu, C and Dominici, Francesca and Parmigiani, G.} } @article {Crai:Digg:Rowl:biva:2008, title = {Bivariate Binomial Spatial Modeling of Loa Loa Prevalence in Tropical Africa}, journal = {Journal of the American Statistical Association}, volume = {103}, number = {481}, year = {2008}, pages = {21{\textendash}37}, keywords = {Geostatistics, low rank, thin-plate splines}, author = {Crainiceanu, C and Diggle, Peter J. and Rowlingson, Barry} } @article {Caff:Crai:Deng:Hend:case:2008, title = {A Case Study in Pharmacologic Colon Imaging Using Principal Curves in Single-Photon Emission Computed Tomography}, journal = {Journal of the American Statistical Association}, volume = {103}, number = {484}, year = {2008}, pages = {1470{\textendash}1480}, keywords = {Curve fitting, medical imaging, Pharmacology, Smoothing, SPECT}, author = {Caffo, B and Crainiceanu, C and Deng, Lijuan and Hendrix, C} } @article {suskauer2008fmri, title = {fMRI of Intrasubject Variability in ADHD: Anomalous Premotor Activity With Prefrontal Compensation}, journal = {Journal of American Academy of Child \& Adolescent Psychiatry, NIHMSID: 71813}, volume = {47}, number = {10}, year = {2008}, pages = {1141{\textendash}1150}, author = {Suskauer, S and Simmonds, D and Caffo, B and Denckla, M and Pekar, J and Mostofsky, S} } @article {caffo2008likelihood, title = {Likelihood Estimation of Conjugacy Relationships in Linear Models with Applications to High-Throughput Genomics}, journal = {International Journal of Biostatistics, PMCID: PMC2827886}, volume = {5}, year = {2008}, note = {Issue 18}, publisher = {bepress}, author = {Caffo, B and Dongmei, L and Scharpf, R and Parmigiani, G.} } @article {pmid18552590, title = {Model selection and health effect estimation in environmental epidemiology}, journal = {Epidemiology}, volume = {19}, number = {4}, year = {2008}, month = {Jul}, pages = {558{\textendash}560}, author = {Dominici, F. and Wang, C. and Crainiceanu, C and Parmigiani, G.} } @article {Wager08, title = {Prefrontal-Subcortical Pathways Mediating Successful Emotion Regulation}, journal = {Neuron}, volume = {59}, year = {2008}, pages = {1037-1050}, author = {Wager, T.D. and Davidson, M.L. and Hughes, B.L. and Lindquist, Martin A and Ochsner, K.N.} } @article {Huys2008, title = {Psychiatry : insights into depression through normative decision-making models}, journal = {Control}, year = {2008}, pages = {1{\textendash}8}, author = {Huys, Quentin J M and Vogelstein, Joshua T and Dayan, Peter} } @article {Crai:Digg:Rowl:rejo:2008, title = {Rejoinder}, journal = {Journal of the American Statistical Association}, volume = {103}, number = {481}, year = {2008}, pages = {43{\textendash}43}, author = {Crainiceanu, C and Diggle, Peter J. and Rowlingson, Barry} } @article {caffo2007brain, title = {Are Brain Volumes based on Magnetic Resonance Imaging Mediators of the Associations of Cumulative Lead Dose with Cognitive Function?}, journal = {American Journal of Epidemiology}, volume = {167}, number = {4}, year = {2007}, pages = {429{\textendash}437}, publisher = {Oxford Univ Press}, author = {Caffo, B and Chen, S and Stewart, W and Bolla, K and Yousem, D and Davatzikos, C. and Schwartz, B} } @article {schwartz2007relations, title = {Relations of brain volumes with cognitive function in males 45 years and older with past lead exposure}, journal = {Neuroimage, PMCID: PMC2038986}, volume = {37}, number = {2}, year = {2007}, pages = {633{\textendash}641}, publisher = {Elsevier}, author = {Schwartz, B and Chen, S and Caffo, B and Stewart, W and Bolla, K and Yousem, D and Davatzikos, C.} } @article {yacoub2003spin, title = {Spin-echo fMRI in humans using high spatial resolutions and high magnetic fields}, journal = {Magnetic resonance in medicine}, volume = {49}, number = {4}, year = {2003}, pages = {655{\textendash}664}, publisher = {Wiley Online Library}, author = {Yacoub, Essa and Duong, Timothy Q and De Moortele, Van and Lindquist, Martin A and Adriany, Gregor and Kim, Seong-Gi and U{\u g}urbil, K{\^a}mil and Hu, Xiaoping and others} } @article {caffo2002empirical, title = {Empirical supremum rejection sampling}, journal = {Biometrika}, volume = {89}, number = {4}, year = {2002}, pages = {745{\textendash}754}, publisher = {Biometrika Trust}, author = {Caffo, B and Booth, J and Davison, A} }